Complet list of 1bom con file
Complete list of 1bom.con file
COMMENT BEGIN
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COMMENT END
CONTACTS BETWEEN
CHAIN(S) "A"
AND
CHAIN(S) "A"
HYDROPHOBIC 2.00 3.80 87
C A 0001 GLY CA 3.789 H A 0002 ILE CA
C A 0001 GLY C 2.404 H A 0002 ILE CA
C A 0001 GLY C 3.215 H A 0002 ILE C
C A 0001 GLY C 3.567 H A 0002 ILE CB
H A 0002 ILE C 2.421 H A 0003 VAL CA
H A 0002 ILE C 3.096 H A 0003 VAL C
H A 0002 ILE C 3.673 H A 0003 VAL CB
H A 0002 ILE CD1 3.458 H A 0016 LEU CD2
H A 0002 ILE CB 3.609 H A 0019 TYR CE2
H A 0002 ILE CD1 3.668 H A 0019 TYR CD2
H A 0003 VAL CA 3.796 H A 0004 ASP CA
H A 0003 VAL C 2.400 H A 0004 ASP CA
H A 0003 VAL C 3.053 H A 0004 ASP C
H A 0003 VAL C 3.663 H A 0004 ASP CB
H A 0004 ASP CA 3.750 H A 0005 GLU CA
H A 0004 ASP C 2.391 H A 0005 GLU CA
H A 0004 ASP C 3.357 H A 0005 GLU C
H A 0004 ASP C 3.507 H A 0005 GLU CB
H A 0004 ASP CA 3.527 H A 0008 LEU CD1
H A 0004 ASP C 3.744 H A 0008 LEU CB
H A 0004 ASP C 3.714 H A 0008 LEU CD1
H A 0004 ASP CB 3.467 H A 0008 LEU CD1
H A 0005 GLU C 2.424 H A 0006 CYS CA
H A 0005 GLU C 3.273 H A 0006 CYS C
H A 0005 GLU C 3.632 H A 0006 CYS CB
H A 0006 CYS CA 3.791 H A 0007 CYS CA
H A 0006 CYS C 2.409 H A 0007 CYS CA
H A 0006 CYS C 2.993 H A 0007 CYS C
H A 0006 CYS C 3.672 H A 0007 CYS CB
H A 0007 CYS CA 3.766 H A 0008 LEU CA
H A 0007 CYS C 2.418 H A 0008 LEU CA
H A 0007 CYS C 3.147 H A 0008 LEU C
H A 0007 CYS C 3.591 H A 0008 LEU CB
H A 0008 LEU C 2.443 C A 0009 ARG CA
H A 0008 LEU C 3.603 C A 0009 ARG C
H A 0008 LEU C 3.396 C A 0009 ARG CB
H A 0008 LEU C 3.492 C A 0009 ARG CG
C A 0009 ARG CA 2.866 C A 0010 PRO CD
C A 0009 ARG C 2.435 C A 0010 PRO CA
C A 0009 ARG C 2.892 C A 0010 PRO C
C A 0009 ARG C 3.629 C A 0010 PRO CB
C A 0009 ARG C 3.670 C A 0010 PRO CG
C A 0009 ARG C 2.489 C A 0010 PRO CD
C A 0009 ARG CB 3.197 C A 0010 PRO CD
C A 0010 PRO CA 3.762 C A 0011 CYS CA
C A 0010 PRO C 2.408 C A 0011 CYS CA
C A 0010 PRO C 3.620 C A 0011 CYS C
C A 0010 PRO C 3.011 C A 0011 CYS CB
C A 0011 CYS CA 3.776 C A 0012 SER CA
C A 0011 CYS C 2.415 C A 0012 SER CA
C A 0011 CYS C 2.821 C A 0012 SER C
C A 0011 CYS C 3.640 C A 0012 SER CB
C A 0011 CYS CA 3.489 H A 0015 VAL CB
C A 0011 CYS CA 3.773 H A 0015 VAL CG1
C A 0011 CYS C 3.428 H A 0015 VAL CB
C A 0011 CYS C 3.776 H A 0015 VAL CG2
C A 0012 SER C 2.458 H A 0013 VAL CA
C A 0012 SER C 2.854 H A 0013 VAL C
C A 0012 SER C 3.542 H A 0013 VAL CB
H A 0013 VAL CA 3.776 H A 0014 ASP CA
H A 0013 VAL C 2.373 H A 0014 ASP CA
H A 0013 VAL C 2.967 H A 0014 ASP C
H A 0013 VAL C 3.656 H A 0014 ASP CB
H A 0013 VAL CG2 3.673 H A 0017 LEU CD1
H A 0014 ASP C 2.424 H A 0015 VAL CA
H A 0014 ASP C 3.551 H A 0015 VAL C
H A 0014 ASP C 3.397 H A 0015 VAL CB
H A 0014 ASP C 3.378 H A 0015 VAL CG2
H A 0015 VAL CA 3.795 H A 0016 LEU CA
H A 0015 VAL C 2.416 H A 0016 LEU CA
H A 0015 VAL C 3.139 H A 0016 LEU C
H A 0015 VAL C 3.651 H A 0016 LEU CB
H A 0016 LEU CA 3.727 H A 0017 LEU CA
H A 0016 LEU C 2.385 H A 0017 LEU CA
H A 0016 LEU C 2.899 H A 0017 LEU C
H A 0016 LEU C 3.598 H A 0017 LEU CB
H A 0017 LEU CA 3.764 H A 0018 SER CA
H A 0017 LEU C 2.408 H A 0018 SER CA
H A 0017 LEU C 3.271 H A 0018 SER C
H A 0017 LEU C 3.596 H A 0018 SER CB
H A 0018 SER C 2.405 H A 0019 TYR CA
H A 0018 SER C 3.062 H A 0019 TYR C
H A 0018 SER C 3.669 H A 0019 TYR CB
H A 0019 TYR CA 3.787 C A 0020 CYS CA
H A 0019 TYR C 2.407 C A 0020 CYS CA
H A 0019 TYR C 3.239 C A 0020 CYS C
H A 0019 TYR C 3.611 C A 0020 CYS CB
CHARGE_ATTR 2.00 12.00 7
H A 0004 ASP OD1 8.777 C A 0009 ARG NH1
H A 0004 ASP OD1 10.59 C A 0009 ARG NH2
H A 0004 ASP OD2 10.70 C A 0009 ARG NH1
H A 0005 GLU OE1 6.566 C A 0009 ARG NH1
H A 0005 GLU OE1 7.873 C A 0009 ARG NH2
H A 0005 GLU OE2 4.712 C A 0009 ARG NH1
H A 0005 GLU OE2 5.955 C A 0009 ARG NH2
CHARGE_REPU 2.00 12.00 4
H A 0004 ASP OD1 5.136 H A 0005 GLU OE1
H A 0004 ASP OD1 5.468 H A 0005 GLU OE2
H A 0004 ASP OD2 7.256 H A 0005 GLU OE1
H A 0004 ASP OD2 7.607 H A 0005 GLU OE2
HB_MM 2.00 3.20 29
H A 0002 ILE N 2.217 C A 0001 GLY O
H A 0003 VAL N 2.215 H A 0002 ILE O
H A 0004 ASP N 2.211 H A 0003 VAL O
H A 0005 GLU N 2.797 H A 0003 VAL O
H A 0005 GLU N 2.216 H A 0004 ASP O
H A 0006 CYS N 3.167 H A 0002 ILE O
H A 0006 CYS N 2.222 H A 0005 GLU O
H A 0007 CYS N 2.806 H A 0003 VAL O
H A 0007 CYS N 2.215 H A 0006 CYS O
H A 0008 LEU N 2.220 H A 0007 CYS O
C A 0009 ARG N 2.222 H A 0008 LEU O
C A 0010 PRO N 2.219 C A 0009 ARG O
C A 0011 CYS N 2.217 C A 0010 PRO O
C A 0012 SER N 2.218 C A 0011 CYS O
H A 0013 VAL N 2.235 C A 0012 SER O
H A 0014 ASP N 2.389 C A 0012 SER O
H A 0014 ASP N 2.181 H A 0013 VAL O
H A 0015 VAL N 2.529 C A 0012 SER O
H A 0015 VAL N 2.414 H A 0013 VAL O
H A 0015 VAL N 2.217 H A 0014 ASP O
H A 0016 LEU N 2.918 H A 0013 VAL O
H A 0016 LEU N 2.221 H A 0015 VAL O
H A 0017 LEU N 2.818 H A 0013 VAL O
H A 0017 LEU N 2.216 H A 0016 LEU O
H A 0018 SER N 2.778 H A 0016 LEU O
H A 0018 SER N 2.220 H A 0017 LEU O
H A 0019 TYR N 2.688 H A 0016 LEU O
H A 0019 TYR N 2.217 H A 0018 SER O
C A 0020 CYS N 2.217 H A 0019 TYR O
HB_SS 2.00 3.20 1
H A 0005 GLU OE1 2.734 H A 0019 TYR OH
SS_BOND 1.50 2.80 1
H A 0006 CYS SG 2.020 C A 0011 CYS SG
COMMENT BEGIN
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COMMENT END
CONTACTS BETWEEN
CHAIN(S) "A"
AND
CHAIN(S) "B"
HYDROPHOBIC 2.00 3.80 11
H A 0002 ILE CG1 3.718 H B 0011 LEU CG
H A 0002 ILE CG1 3.338 H B 0011 LEU CD1
H A 0002 ILE CD1 3.659 H B 0011 LEU CD1
H A 0002 ILE CD1 3.572 H B 0015 LEU CD1
H A 0003 VAL CG2 3.787 C B 0007 CYS CA
H A 0006 CYS C 3.384 C B 0005 THR CB
H A 0006 CYS C 3.679 C B 0005 THR CG2
H A 0007 CYS CB 3.662 C B 0007 CYS CB
H A 0013 VAL CG2 3.612 H B 0018 LEU CD2
H A 0016 LEU CB 3.763 H B 0018 LEU CD1
H A 0019 TYR CB 3.647 H B 0015 LEU CD1
HB_MS 2.00 3.20 1
H A 0006 CYS O 2.673 C B 0005 THR OG1
SS_BOND 1.50 2.80 2
H A 0007 CYS SG 2.024 C B 0007 CYS SG
C A 0020 CYS SG 2.021 H B 0019 CYS SG
COMMENT BEGIN
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COMMENT END
CONTACTS BETWEEN
CHAIN(S) "B"
AND
CHAIN(S) "B"
HYDROPHOBIC 2.00 3.80 121
C B -001 GLN CA 2.806 C B 0000 PRO CD
C B -001 GLN C 2.424 C B 0000 PRO CA
C B -001 GLN C 3.048 C B 0000 PRO C
C B -001 GLN C 3.641 C B 0000 PRO CB
C B -001 GLN C 3.646 C B 0000 PRO CG
C B -001 GLN C 2.454 C B 0000 PRO CD
C B 0000 PRO C 2.407 C B 0001 GLN CA
C B 0000 PRO C 3.119 C B 0001 GLN C
C B 0000 PRO C 3.659 C B 0001 GLN CB
C B 0001 GLN CA 3.796 C B 0002 ALA CA
C B 0001 GLN C 2.413 C B 0002 ALA CA
C B 0001 GLN C 3.680 C B 0002 ALA C
C B 0001 GLN C 2.827 C B 0002 ALA CB
C B 0002 ALA CA 3.782 C B 0003 VAL CA
C B 0002 ALA C 2.411 C B 0003 VAL CA
C B 0002 ALA C 3.685 C B 0003 VAL C
C B 0002 ALA C 3.035 C B 0003 VAL CB
C B 0003 VAL CA 3.775 C B 0004 HIS CA
C B 0003 VAL C 2.412 C B 0004 HIS CA
C B 0003 VAL C 2.857 C B 0004 HIS C
C B 0003 VAL C 3.643 C B 0004 HIS CB
C B 0003 VAL C 3.704 C B 0004 HIS CG
C B 0003 VAL C 3.730 C B 0004 HIS CD2
C B 0003 VAL C 3.455 C B 0005 THR CG2
C B 0004 HIS CA 3.772 C B 0005 THR CA
C B 0004 HIS C 2.406 C B 0005 THR CA
C B 0004 HIS C 2.874 C B 0005 THR C
C B 0004 HIS C 3.060 C B 0005 THR CB
C B 0004 HIS C 3.610 C B 0005 THR CG2
C B 0005 THR CA 3.646 C B 0006 TYR CD1
C B 0005 THR CA 3.543 C B 0006 TYR CE1
C B 0005 THR CA 3.673 C B 0006 TYR CZ
C B 0005 THR C 2.420 C B 0006 TYR CA
C B 0005 THR C 3.539 C B 0006 TYR C
C B 0005 THR C 3.330 C B 0006 TYR CB
C B 0005 THR C 2.995 C B 0006 TYR CG
C B 0005 THR C 2.860 C B 0006 TYR CD1
C B 0005 THR C 3.567 C B 0006 TYR CD2
C B 0005 THR C 3.328 C B 0006 TYR CE1
C B 0006 TYR C 2.407 C B 0007 CYS CA
C B 0006 TYR C 3.680 C B 0007 CYS C
C B 0006 TYR C 3.093 C B 0007 CYS CB
C B 0006 TYR CB 3.296 H B 0010 HIS CB
C B 0006 TYR C 3.698 H B 0011 LEU CD2
C B 0006 TYR CB 3.680 H B 0011 LEU CD2
C B 0007 CYS C 2.426 C B 0008 GLY CA
C B 0007 CYS C 3.124 C B 0008 GLY C
C B 0008 GLY C 2.443 H B 0009 ARG CA
C B 0008 GLY C 3.001 H B 0009 ARG C
C B 0008 GLY C 2.970 H B 0009 ARG CB
H B 0009 ARG CA 3.768 H B 0010 HIS CA
H B 0009 ARG C 2.386 H B 0010 HIS CA
H B 0009 ARG C 2.831 H B 0010 HIS C
H B 0009 ARG C 3.626 H B 0010 HIS CB
H B 0009 ARG CD 3.644 H B 0010 HIS CE1
H B 0010 HIS CA 3.787 H B 0011 LEU CA
H B 0010 HIS C 2.409 H B 0011 LEU CA
H B 0010 HIS C 3.239 H B 0011 LEU C
H B 0010 HIS C 3.629 H B 0011 LEU CB
H B 0010 HIS C 3.463 H B 0011 LEU CD2
H B 0011 LEU CA 3.788 H B 0012 ALA CA
H B 0011 LEU C 2.397 H B 0012 ALA CA
H B 0011 LEU C 3.052 H B 0012 ALA C
H B 0011 LEU C 3.667 H B 0012 ALA CB
H B 0012 ALA CA 3.776 H B 0013 ARG CA
H B 0012 ALA C 2.414 H B 0013 ARG CA
H B 0012 ALA C 3.256 H B 0013 ARG C
H B 0012 ALA C 3.589 H B 0013 ARG CB
H B 0013 ARG CA 3.785 H B 0014 THR CA
H B 0013 ARG C 2.421 H B 0014 THR CA
H B 0013 ARG C 3.043 H B 0014 THR C
H B 0013 ARG C 3.671 H B 0014 THR CB
H B 0014 THR C 2.414 H B 0015 LEU CA
H B 0014 THR C 3.076 H B 0015 LEU C
H B 0014 THR C 3.677 H B 0015 LEU CB
H B 0014 THR C 3.733 H B 0018 LEU CD1
H B 0014 THR CG2 3.370 H B 0018 LEU CD1
H B 0015 LEU CA 3.752 H B 0016 ALA CA
H B 0015 LEU C 2.397 H B 0016 ALA CA
H B 0015 LEU C 3.304 H B 0016 ALA C
H B 0015 LEU C 3.532 H B 0016 ALA CB
H B 0016 ALA CA 3.750 H B 0017 ASP CA
H B 0016 ALA C 2.410 H B 0017 ASP CA
H B 0016 ALA C 3.316 H B 0017 ASP C
H B 0016 ALA C 3.550 H B 0017 ASP CB
H B 0017 ASP CA 3.772 H B 0018 LEU CA
H B 0017 ASP C 2.401 H B 0018 LEU CA
H B 0017 ASP C 3.133 H B 0018 LEU C
H B 0017 ASP C 3.634 H B 0018 LEU CB
H B 0017 ASP CA 3.655 H B 0020 TRP CB
H B 0017 ASP C 3.454 H B 0020 TRP CB
H B 0018 LEU CA 3.777 H B 0019 CYS CA
H B 0018 LEU C 2.393 H B 0019 CYS CA
H B 0018 LEU C 2.844 H B 0019 CYS C
H B 0018 LEU C 3.674 H B 0019 CYS CB
H B 0019 CYS CA 3.758 H B 0020 TRP CA
H B 0019 CYS C 2.421 H B 0020 TRP CA
H B 0019 CYS C 3.195 H B 0020 TRP C
H B 0019 CYS C 3.614 H B 0020 TRP CB
H B 0020 TRP CA 3.795 H B 0021 GLU CA
H B 0020 TRP C 2.402 H B 0021 GLU CA
H B 0020 TRP C 3.181 H B 0021 GLU C
H B 0020 TRP C 3.632 H B 0021 GLU CB
H B 0020 TRP C 3.788 C B 0024 VAL CG2
H B 0020 TRP CD2 3.613 C B 0024 VAL CG2
H B 0020 TRP CE3 3.389 C B 0024 VAL CG2
H B 0020 TRP CZ3 3.638 C B 0024 VAL CG2
H B 0021 GLU CA 3.779 H B 0022 ALA CA
H B 0021 GLU C 2.406 H B 0022 ALA CA
H B 0021 GLU C 3.075 H B 0022 ALA C
H B 0021 GLU C 3.656 H B 0022 ALA CB
H B 0022 ALA CA 3.784 C B 0023 GLY CA
H B 0022 ALA C 2.419 C B 0023 GLY CA
H B 0022 ALA C 3.627 C B 0023 GLY C
C B 0023 GLY C 2.422 C B 0024 VAL CA
C B 0023 GLY C 2.859 C B 0024 VAL C
C B 0023 GLY C 3.680 C B 0024 VAL CB
C B 0024 VAL CA 3.786 C B 0025 ASP CA
C B 0024 VAL C 2.408 C B 0025 ASP CA
C B 0024 VAL C 2.949 C B 0025 ASP C
C B 0024 VAL C 3.668 C B 0025 ASP CB
CHARGE_ATTR 2.00 12.00 8
H B 0017 ASP OD1 10.93 H B 0010 HIS ND1
H B 0017 ASP OD2 11.23 H B 0010 HIS ND1
H B 0017 ASP OD1 6.094 H B 0013 ARG NH1
H B 0017 ASP OD1 4.339 H B 0013 ARG NH2
H B 0017 ASP OD2 7.731 H B 0013 ARG NH1
H B 0017 ASP OD2 6.236 H B 0013 ARG NH2
H B 0021 GLU OE1 11.80 H B 0013 ARG NH2
H B 0021 GLU OE2 11.41 H B 0013 ARG NH2
CHARGE_REPU 2.00 12.00 17
H B 0009 ARG NH1 6.409 H B 0010 HIS ND1
H B 0009 ARG NH1 5.999 H B 0010 HIS NE2
H B 0009 ARG NH2 5.430 H B 0010 HIS ND1
H B 0009 ARG NH2 4.342 H B 0010 HIS NE2
H B 0009 ARG NH1 9.507 H B 0013 ARG NH1
H B 0009 ARG NH1 11.71 H B 0013 ARG NH2
H B 0009 ARG NH2 10.56 H B 0013 ARG NH1
H B 0010 HIS ND1 8.545 H B 0013 ARG NH1
H B 0010 HIS ND1 10.08 H B 0013 ARG NH2
H B 0010 HIS NE2 10.23 H B 0013 ARG NH1
H B 0010 HIS NE2 11.94 H B 0013 ARG NH2
H B 0017 ASP OD1 7.827 H B 0021 GLU OE1
H B 0017 ASP OD1 7.198 H B 0021 GLU OE2
H B 0017 ASP OD2 6.562 H B 0021 GLU OE1
H B 0017 ASP OD2 5.498 H B 0021 GLU OE2
H B 0021 GLU OE1 11.98 C B 0025 ASP OD1
H B 0021 GLU OE1 10.99 C B 0025 ASP OD2
HB_MM 2.00 3.20 42
C B 0000 PRO N 2.220 C B -001 GLN O
C B 0001 GLN N 2.207 C B 0000 PRO O
C B 0002 ALA N 2.219 C B 0001 GLN O
C B 0003 VAL N 2.210 C B 0002 ALA O
C B 0004 HIS N 2.209 C B 0003 VAL O
C B 0005 THR N 2.757 C B 0003 VAL O
C B 0005 THR N 2.213 C B 0004 HIS O
C B 0006 TYR N 2.220 C B 0005 THR O
C B 0007 CYS N 2.209 C B 0006 TYR O
C B 0008 GLY N 2.221 C B 0007 CYS O
H B 0009 ARG N 2.228 C B 0008 GLY O
H B 0010 HIS N 2.392 C B 0008 GLY O
H B 0010 HIS N 2.203 H B 0009 ARG O
H B 0011 LEU N 2.429 H B 0009 ARG O
H B 0011 LEU N 2.224 H B 0010 HIS O
H B 0012 ALA N 2.423 H B 0009 ARG O
H B 0012 ALA N 2.220 H B 0011 LEU O
H B 0013 ARG N 3.037 H B 0009 ARG O
H B 0013 ARG N 3.196 H B 0011 LEU O
H B 0013 ARG N 2.220 H B 0012 ALA O
H B 0014 THR N 2.219 H B 0013 ARG O
H B 0015 LEU N 2.218 H B 0014 THR O
H B 0016 ALA N 2.821 H B 0014 THR O
H B 0016 ALA N 2.208 H B 0015 LEU O
H B 0017 ASP N 3.169 H B 0013 ARG O
H B 0017 ASP N 2.910 H B 0014 THR O
H B 0017 ASP N 2.228 H B 0016 ALA O
H B 0018 LEU N 2.874 H B 0014 THR O
H B 0018 LEU N 2.225 H B 0017 ASP O
H B 0019 CYS N 2.215 H B 0018 LEU O
H B 0020 TRP N 2.642 H B 0018 LEU O
H B 0020 TRP N 2.230 H B 0019 CYS O
H B 0021 GLU N 2.966 H B 0017 ASP O
H B 0021 GLU N 2.666 H B 0018 LEU O
H B 0021 GLU N 2.215 H B 0020 TRP O
H B 0022 ALA N 2.594 H B 0018 LEU O
H B 0022 ALA N 2.217 H B 0021 GLU O
C B 0023 GLY N 2.223 H B 0022 ALA O
C B 0024 VAL N 3.001 H B 0020 TRP O
C B 0024 VAL N 2.221 C B 0023 GLY O
C B 0025 ASP N 2.397 C B 0023 GLY O
C B 0025 ASP N 2.210 C B 0024 VAL O
HB_MS 2.00 3.20 3
C B 0003 VAL O 2.915 C B 0005 THR OG1
C B 0004 HIS O 2.349 C B 0005 THR OG1
H B 0010 HIS O 2.344 H B 0014 THR OG1
AROMATIC 0.00 8.00 2
H B 0009 ARG 5.173 H B 0010 HIS
H B 0013 ARG 8.000 H B 0020 TRP